LA MBON Louisiana Oyster Reef-Associated Benthic Biodiversity - Biodiversity Information

Sampling event Observation
最新バージョン NOAA Integrated Ocean Observing System により出版 5月 26, 2026 NOAA Integrated Ocean Observing System
公開日:
2026年5月26日
ライセンス:
CC-BY 4.0

DwC-A形式のリソース データまたは EML / RTF 形式のリソース メタデータの最新バージョンをダウンロード:

DwC ファイルとしてのデータ ダウンロード 40 レコード English で (25 KB) - 更新頻度: as needed
EML ファイルとしてのメタデータ ダウンロード English で (19 KB)
RTF ファイルとしてのメタデータ ダウンロード English で (14 KB)

説明

This dataset contains abundance and biomass measurements of oyster-reef associated benthic biodiversity as well as extended measures of oyster reef health including sediment organic matter content, volume of reef material, volume and/or counts of live oysters, mussels, and barnacles, and oyster size data. This dataset is also linked with passive acoustic recordings.

データ レコード

この sampling event リソース内のデータは、1 つまたは複数のデータ テーブルとして生物多様性データを共有するための標準化された形式であるダーウィン コア アーカイブ (DwC-A) として公開されています。 コア データ テーブルには、40 レコードが含まれています。

拡張データ テーブルは2 件存在しています。拡張レコードは、コアのレコードについての追加情報を提供するものです。 各拡張データ テーブル内のレコード数を以下に示します。

Event (コア)
40
ExtendedMeasurementOrFact 
994
Occurrence 
500

この IPT はデータをアーカイブし、データ リポジトリとして機能します。データとリソースのメタデータは、 ダウンロード セクションからダウンロードできます。 バージョン テーブルから公開可能な他のバージョンを閲覧でき、リソースに加えられた変更を知ることができます。

バージョン

次の表は、公にアクセス可能な公開バージョンのリソースのみ表示しています。

権利

研究者は権利に関する下記ステートメントを尊重する必要があります。:

パブリッシャーとライセンス保持者権利者は NOAA Integrated Ocean Observing System。 This work is licensed under a Creative Commons Attribution (CC-BY 4.0) License.

GBIF登録

このリソースをはGBIF と登録されており GBIF UUID: a802e813-af22-4047-a7cd-0b9ec9961ce4が割り当てられています。   GBIF-US によって承認されたデータ パブリッシャーとして GBIF に登録されているNOAA Integrated Ocean Observing System が、このリソースをパブリッシュしました。

キーワード

occurrence; oyster; louisiana; oyster reef; benthic; reef-associated; habitat trays; estuarine; observation; oyster; louisiana; oyster reef; benthic; reef-associated; habitat trays; estuarine

連絡先

Stephanie Archer
  • メタデータ提供者
  • 最初のデータ採集者
  • 連絡先
  • Assistant Professor
Louisiana Universities Marine Consortium
70344 Chauvin
LA
US
Felimon Gayanilo
  • データ処理者
  • Information Systems Architect
GCOOS
  • 6300 Ocean Dr
78412 Corpus Christi
TX
US
Mathew Biddle
  • データ配布者
  • Physical Scientist
United States Marine Biodiversity Observation Network (US MBON)
  • 1315 East-West Highway
20910 Silver Spring
MD
US

地理的範囲

Gulf of America

座標(緯度経度) 南 西 [29.061, -90.924], 北 東 [29.636, -90.017]

時間的範囲

生成(収集)期間 07/21/2023 - ongoing

プロジェクトデータ

This project will establish a new MBON effort in coastal Louisiana, focusing on highly productive and diverse estuarine ecosystems as sea level rise sentinels

タイトル Louisiana Deltaic Estuaries MBON: Sea Level Rise Sentinels
ファンデイング NASA 80NSSC23K0165
Study Area Description Louisiana Estuaries (Barataria Bay, Terrebonne Bay, and Atchafalaya Bay)
研究の意図、目的、背景など(デザイン) This larger study is aimed at developing remote methods for measuring estuarine biodiversity in low-visibility environments.
Project Award National Aeronautics and Space Administration(NASA) Grant & Cooperative Agreement
80NSSC23K0165
NASA
80NSSC23K0165
https://govtribe.com/award/federal-contract-award/grant-for-research-80nssc23k0165?recommendationType=similar_recommendations

プロジェクトに携わる要員:

Stephanie Archer
Granger Hanks
Allison Noble
Lillian Zhou
Katherine Schlachter
  • データ提供者

収集方法

At each oyster reef sediment organic matter and reef material are quantified within 6 haphazardly placed 0.25 x 0.25 m quadrats. Within each quadrat, sediment for organic matter quantification is collected by pushing a 50ml core into the sediment. The core contents are then emptied into a pre-labeled whirl-pak. In the lab, organic matter is quantified using the Loss-on-Ignition method. Next, all reef material within the quadrat up to 10cm depth is collected and rinsed of excess mud. Reef material (live and dead shell material) volume is quantified using the volume displacement method and live oysters and mussels are counted. The first ten live oysters are measured for shell height from umbo to tip. Barnacles are recorded on a relative abundance scale: 0 – no live barnacles; 1 – 1-10 live barnacles; 2 – 11-50 live barnacles; 3 – > 50 live barnacles. The contents of the reef material sampling are added to pre-filled benthic habitat trays so that the contents of one quadrat go into one tray. The benthic habitat trays (n=6, 0.48 × 0.48 x 0.10 m; 20 L) are lined with 3-mm chicken wire and 1-mm mesh bags and pre-filled with ~3L of disarticulated oyster shell. Once all six trays are topped with reef material they are placed in a row on the oyster reef running parallel to shore. A hydrophone (ST 300HF or ST 600HF) set to record continuously a with a 48 kHz sampling rate and high pre-amp gain is attached to a sandbag and deployed in the center of the row of trays. All sampling gear is left for two weeks to allow the community to develop. After two weeks the habitat trays are collected by cinching closed the mesh bag prior to pulling the tray off of the bottom. Once all trays are collected the mesh bags are tied shut and removed from the trays. Excess mud is rinsed from the bags and all material is rinsed through a 1mm mesh sieve. Larger shells are removed and all material retained on the mesh is frozen for future analysis. When ready for processing samples are thawed and rinsed through a 1mm sieve. Material retained on the sieve is visually inspected under 10x magnification and all organisms identified are retained and sorted into probable unique taxa groups. Taxa groups are reviewed and identified to the lowest practicable taxonomic unit (typically species). Individuals within taxa groups are counted, weighed, then dried for 48 hours at 60℃, or until a stable dry weight is reached. When new taxa to the dataset taxa are encountered a voucher specimen is collected. The specimen collected as a voucher is placed into 90% ethanol after a wet weight is recorded. This voucher specimen is recorded separately. The voucher specimens are deposited into the LUMCON Natural History Collection so that taxonomic identification can be continually refined it necessary. Post-processing of hydrophone recordings is described elsewhere.

Study Extent Sampling occurs seasonally (4 times a year) in Barataria Bay (n=3 oyster reefs) and Terrebonne Bay (n=3 oyster reefs) in Louisiana. All taxa visible at 10x magnification are identified and quantified.
Quality Control Voucher specimens serve as a quality control for taxonomic identification. Data entry is checked by a second researcher. Purpose-build code is used to identify unusual data entries.

Method step description:

  1. At each oyster reef sediment organic matter and reef material are quantified within 6 haphazardly placed 0.25 x 0.25 m quadrats. Within each quadrat, sediment for organic matter quantification is collected by pushing a 50ml core into the sediment. The core contents are then emptied into a pre-labeled whirl-pak. In the lab, organic matter is quantified using the Loss-on-Ignition method. Next, all reef material within the quadrat up to 10cm depth is collected and rinsed of excess mud. Reef material (live and dead shell material) volume is quantified using the volume displacement method and live oysters and mussels are counted. The first ten live oysters are measured for shell height from umbo to tip. Barnacles are recorded on a relative abundance scale: 0 – no live barnacles; 1 – 1-10 live barnacles; 2 – 11-50 live barnacles; 3 – > 50 live barnacles. The contents of the reef material sampling are added to pre-filled benthic habitat trays so that the contents of one quadrat go into one tray. The benthic habitat trays (n=6, 0.48 × 0.48 x 0.10 m; 20 L) are lined with 3-mm chicken wire and 1-mm mesh bags and pre-filled with ~3L of disarticulated oyster shell. Once all six trays are topped with reef material they are placed in a row on the oyster reef running parallel to shore. A hydrophone (ST 300HF or ST 600HF) set to record continuously a with a 48 kHz sampling rate and high pre-amp gain is attached to a sandbag and deployed in the center of the row of trays. All sampling gear is left for two weeks to allow the community to develop. After two weeks the habitat trays are collected by cinching closed the mesh bag prior to pulling the tray off of the bottom. Once all trays are collected the mesh bags are tied shut and removed from the trays. Excess mud is rinsed from the bags and all material is rinsed through a 1mm mesh sieve. Larger shells are removed and all material retained on the mesh is frozen for future analysis. When ready for processing samples are thawed and rinsed through a 1mm sieve. Material retained on the sieve is visually inspected under 10x magnification and all organisms identified are retained and sorted into probable unique taxa groups. Taxa groups are reviewed and identified to the lowest practicable taxonomic unit (typically species). Individuals within taxa groups are counted, weighed, then dried for 48 hours at 60℃, or until a stable dry weight is reached. When new taxa to the dataset taxa are encountered a voucher specimen is collected. The specimen collected as a voucher is placed into 90% ethanol after a wet weight is recorded. This voucher specimen is recorded separately. The voucher specimens are deposited into the LUMCON Natural History Collection so that taxonomic identification can be continually refined it necessary. Post-processing of hydrophone recordings is described elsewhere.

追加のメタデータ

謝辞
はじめに
目的
メンテナンス内容 NA
代替識別子 a802e813-af22-4047-a7cd-0b9ec9961ce4
https://ipt-obis.gbif.us/resource?r=biodiversityinformation_2023_oysterreefs_la_mbon