說明
This data consists of counts of putative zooplankton OTUs, revealed through metabarcoding of the cytochrome oxidase I (COI) gene extracted from filtered water samples in the Florida Keys National Marine Sanctuary during 2016. It includes results from 95 water samples taken over three days at three coral reef sites. After data processing, a total of 194 taxa were identified; the identification was to the species level, with only a few to the genus level.
資料紀錄
此資源出現紀錄的資料已發佈為達爾文核心集檔案（DwC-A），其以一或多組資料表構成分享生物多樣性資料的標準格式。 核心資料表包含 3,123 筆紀錄。
亦存在 1 筆延伸集的資料表。延伸集中的紀錄補充核心集中紀錄的額外資訊。 每個延伸集資料表中資料筆數顯示如下。
此 IPT 存放資料以提供資料儲存庫服務。資料與資源的詮釋資料可由「下載」單元下載。「版本」表格列出此資源的其它公開版本，以便利追蹤其隨時間的變更。
版本
以下的表格只顯示可公開存取資源的已發布版本。
如何引用
研究者應依照以下指示引用此資源。:
Djurhuus A, Peralta A C, Pitz K, Sawaya N A, Rojas-Marquez J, Michaud B, Montes E, Muller-Karger F, Breitbart M (2023). Marine zooplankton community structure through environmental DNA metabarcoding in the Florida Keys, collected by the South Florida Program (NOAA/AOML) and the Marine Biodiversity Observation Network (MBON). Version 1.3. United States Geological Survey. Occurrence dataset. https://ipt-obis.gbif.us/resource?r=mbonfknmsedna&v=1.3
權利
研究者應尊重以下權利聲明。:
此資料的發布者及權利單位為 United States Geological Survey。 To the extent possible under law, the publisher has waived all rights to these data and has dedicated them to the Public Domain (CC0 1.0). Users may copy, modify, distribute and use the work, including for commercial purposes, without restriction.
GBIF 註冊
此資源已向GBIF註冊，並指定以下之GBIF UUID: 9d6c78cc-74c6-4a12-b65b-0c9254ddb0b6。 United States Geological Survey 發佈此資源，並經由GBIF-US同意向GBIF註冊成為資料發佈者。
關鍵字
Occurrence; zooplankton; DNA sequencing; molecular taxonomy; biodiversity; ocean environment; Occurrence; Observation
聯絡資訊
- 元數據提供者 ●
- 出處 ●
- 連絡人
https://orcid.org/0000-0002-3517-7522
- 元數據提供者 ●
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- 連絡人
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- 散布者
地理涵蓋範圍
Florida Keys: Molasses Reef, Looe Key, and Western Sambo
| 界定座標範圍 | 緯度南界 經度西界 [24.286, -81.654], 緯度北界 經度東界 [25.352, -80.228] |
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分類群涵蓋範圍
Zooplankton, including 194 taxa within 37 Classes.
| Class | Coccolithophyceae, Copepoda, Teleostei, Ascidiacea, Hydrozoa, Sagittoidea, Malacostraca, Gastropoda, Mamiellophyceae, Eurotiomycetes, Chlorarachnea, Bacillariophyceae, Polychaeta, Ostracoda, Palaeonemertea, Anthozoa, Cephalopoda, Pilidiophora, Demospongiae, Ophiuroidea, Thecostraca, Florideophyceae, Cyanophyceae, Holothuroidea, Pyramimonadophyceae, Hexapoda, Homoscleromorpha, Bivalvia, Elasmobranchii, Gymnolaemata, Asteroidea, Dinophyceae, Cryptophyta incertae sedis, Raphidophyce, Echinoidea, Aves, Nuda |
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時間涵蓋範圍
| 起始日期 / 結束日期 | 2016-03-15 / 2016-05-16 |
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計畫資料
A close partnership with NOAA AOML and the FKNMS has focused on periodic MBON surveys of the Florida Keys since 2014. Additional partners now add animal tracking and other dimensions to the Sanctuaries MBON. Specifically, we seek to integrate ground and satellite observations related to biodiversity to inform ecosystem-based management in and around the Florida Keys National Marine Sanctuary (FKNMS). This includes supporting the regional NOAA Integrated Ecosystem Assessment (IEA), the National Marine Fisheries Southeast Fisheries Science Center, the FKNMS, Rookery Bay National Estuarine Research Reserve (NERR), and the State of Florida Fish and Wildlife Commission (FWC) as specific end users of an MBON.
| 計畫名稱 | South Florida Program (NOAA – AOML) and Marine Biodiversity Observation Network (MBON) |
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| 經費來源 | This work is a contribution to the Marine Biodiversity Observation Network (MBON). The MBON project was supported by NASA grant NNX14AP62A ‘National Marine Sanctuaries as Sentinel Sites for a Demonstration Marine Biodiversity Observation Network (MBON)’ funded under the National Ocean Partnership Programme (NOPP RFP NOAA-NOS-IOOS-2014-2003803 in partnership between NOAA, BOEM and NASA), and the U.S. Integrated Ocean Observing System (IOOS) Programme Office. |
參與計畫的人員:
取樣方法
This data represents zooplankton taxonomic composition revealed through metabarcoding of the cytochrome oxidase I (COI) genes. Water samples were collected from three coral reef sites in the Florida Keys National Marine Sanctuary. 1 L surface seawater samples prefiltered through 3 um filters and subsequently collected on 0.22 um filters for eDNA (PF-eDNA). The COI gene metabarcoding of PF-eDNA samples was performed using Illumina MiSeq.
| 研究範圍 | Sampling area: Florida Keys - Molasses Reef, Looe Key, and Western Sambo. |
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方法步驟描述:
- https://aslopubs.onlinelibrary.wiley.com/doi/10.1002/lom3.10237
額外的詮釋資料
| 目的 | MBON cruises have the purpose of collection biological data for biodiversity assessments. Water samples were used to determine dominant copepod survey using eDNA, demonstrating that eDNA metabarcoding is a promising technique for future biodiversity assessments of pelagic zooplankton in marine systems. |
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| 替代的識別碼 | 9d6c78cc-74c6-4a12-b65b-0c9254ddb0b6 |
| https://ipt-obis.gbif.us/resource?r=mbonfknmsedna |